- #HOW TO CITE IMAGEJ SOFTWARE FOR FREE#
- #HOW TO CITE IMAGEJ SOFTWARE HOW TO#
- #HOW TO CITE IMAGEJ SOFTWARE MANUALS#
- #HOW TO CITE IMAGEJ SOFTWARE SOFTWARE#
- #HOW TO CITE IMAGEJ SOFTWARE CODE#
#HOW TO CITE IMAGEJ SOFTWARE SOFTWARE#
At the time of this writing, the ImageJ's user mailing list had more than 2000 subscribers and is a very active discussion meeting point for everything related to this software and related projects. This is one of the reasons for ImageJ's success among scientists that work with images regularly, along with the huge amount of macros and plugins available from the web page.
#HOW TO CITE IMAGEJ SOFTWARE CODE#
ImageJ was born.ĭuring the development process, a great deal of care was taken to allow users to extend ImageJ's native capabilities with the help of macros that can be developed even by users with no prior programming experience and an open API allowed experienced programmers to code their own plugins. This allowed Wayne to start porting his software so it would work on PCs, and at the same time maintain a single, multi-platform version of the source code. In 1995, the Java programming language was created by Sun Microsystems. NIH Image was developed specifically for Apple systems and didn't work on the Windows platform. This imaging software became increasingly popular, but at the time the market for Apple computers was being surpassed by the PC.
#HOW TO CITE IMAGEJ SOFTWARE FOR FREE#
He started distributing his software for free to anyone who requested it. That year, Wayne Rasband started coding a piece of software named "NIH Image" (after the National Institute of Health (USA), which funded his efforts) in order to provide a way to perform image analysis on the old Apple Macintosh II, which lacked an image analysis platform, and was starting to be the desktop system of choice for many scientists. ImageJ's development started as long ago as 1987, when it was not even named ImageJ and Java was yet to be born. Readers who wish to read a more in-depth text about ImageJ's history should obtain the paper "NIH Image to ImageJ: 25 years of image analysis", published in Nature Methods, 2012, 9:7, pages 671-675.
#HOW TO CITE IMAGEJ SOFTWARE HOW TO#
Finally, you will get to know some different ImageJ plugins and will learn how to implement your own. You will also find the instructions necessary to record all the steps you perform so they can be saved and re-run on the same image to ensure analysis reproducibility. You will also learn how to make modifications through ImageJ filters and how to make local measurements using the selections system. Image Processing with ImageJ will start by showing you how to open a number of different images, become familiar with the different options, and perform simple analysis operations using the provided image samples. ImageJ is an excellent public domain imaging analysis platform that can be very easily used for almost all your image processing needs. Image Processing with ImageJ is a practical book that will guide you from the most basic analysis techniques to the fine details of implementing new functionalities through the ImageJ plugin system, all of it through the use of examples and practical cases. ImageJ’s long history and ever-growing user base makes it a perfect candidate for solving daily tasks involving all kinds of image analysis processes. If no guidance exists, best practices for software citation elements are below.Digital image processing is an increasingly important field across a vast array of scientific disciplines. Many software packages also give guidance on how they want to be cited.
#HOW TO CITE IMAGEJ SOFTWARE MANUALS#
Some guidelines on citing software from publishers and manuals of style are included here. If guidelines from your publisher or citation style exist, follow them, or if writing for publication check with your editor.
Where no more specific guidance exists, consider following the Force11 recommendations to put software citations in the reference list: "Software citations should be accorded the same importance in the scholarly record as citations of other research products, such as publications and data, they should be included in the metadata of the citing work, for example in the reference list of a journal article, and should not be omitted or separated." Where software and data citations should go may vary from publisher to publisher check with the author guidelines if writing for publication. "Software should be cited on the same basis as any other research product such as a paper or a book that is, authors should cite the appropriate set of software products just as they cite the appropriate set of papers." The Force11 recommendations: "citation is partly a record of software important to a research outcome". Cite the software that was used in your research, including all software that was used to generate and analyze data.
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